BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033H01LP1|AL429810
(861 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1044 1688 0.0
3x_Contig720 147 2e-35
3x_Contig587 147 2e-35
3x_Contig1798 145 1e-34
3x_Contig848 138 2e-32
3x_Contig1 132 2e-30
3x_Contig1347 130 6e-30
3x_Contig1020 130 6e-30
3x_Contig537 106 1e-22
>3x_Contig1044
Length = 4552
Score = 1688 bits (847), Expect = 0.0
Identities = 854/861 (99%)
Strand = Plus / Minus
Query: 1 gatcccaaaatgcaagtaattcctgaagttgcgagccgataccatcgcagctacaagcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4007 gatcccaaaatgcaagtaattcctgaagttgcgagccgataccatcgcagctacaagcgt 3948
Query: 61 agtgccaatccctatttccagctcaaattccgctcgcagtctcttctcatctccactagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3947 agtgccaatccctatttccagctcaaattccgctcgcagtctcttctcatctccactagt 3888
Query: 121 aatctctctctctattctgcaaggcacgccacagttttagatatgaaaagtttgaatatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3887 aatctctctctctattctgcaaggcacgccacagttttagatatgaaaagtttgaatatt 3828
Query: 181 ttgcagcctaaagagagagcgagataggaaaggaaacagtagtgaagtaacaagaggata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3827 ttgcagcctaaagagagagcgagataggaaaggaaacagtagtgaagtaacaagaggata 3768
Query: 241 aggaggagaaacttcgatattgtaaaactgttaggttgtgcgtcagtatgtgcaagatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3767 aggaggagaaacttcgatattgtaaaactgttaggttgtgcgtcagtatgtgcaagatta 3708
Query: 301 gctcagtggtcattattagctttcacttttaagtaattatatytctatttatctgattga 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3707 gctcagtggtcattattagctttcacttttaagtaattatatttctatttatctgattga 3648
Query: 361 gaagggagatagggaaaamataaagccctgtggggggctcgaacccccaaccttgtgatt 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 3647 gaagggagatagggaaaaaataaagccctgtggggggctcgaacccccaaccttgtgatt 3588
Query: 421 aagagtcacacgcgcyaccgattgcgccaacaaggcattaagatgcyacaagagcgcatt 480
||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 3587 aagagtcacacgcgctaccgattgcgccaacaaggcattaagatgctacaagagcgcatt 3528
Query: 481 tttcttctctatgacttagatgcaatatcatttttttctattcatccgtatccagcatct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3527 tttcttctctatgacttagatgcaatatcatttttttctattcatccgtatccagcatct 3468
Query: 541 ttcttactgacggtttaaacaaatcgaagtgagatgatatcgtgcccgtaccctcaattg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3467 ttcttactgacggtttaaacaaatcgaagtgagatgatatcgtgcccgtaccctcaattg 3408
Query: 601 gtctaacattcagtcaccttctgatcaacccttccccagtaatctagtcattgcyacttc 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 3407 gtctaacattcagtcaccttctgatcaacccttccccagtaatctagtcattgctacttc 3348
Query: 661 tcacttgtytcattatyacgcatttaaaaaagcattgagggtattctatgatttcccttg 720
|||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3347 tcacttgtttcattattacgcatttaaaaaagcattgagggtattctatgatttcccttg 3288
Query: 721 tacaagcaagataactgcacaagtttggaaacgaaggtacgcacagaagaaagacaacct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3287 tacaagcaagataactgcacaagtttggaaacgaaggtacgcacagaagaaagacaacct 3228
Query: 781 accagcaagtgtgcacttttaaaactatgtcattagttaaaaaagagccaggttctacca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3227 accagcaagtgtgcacttttaaaactatgtcattagttaaaaaagagccaggttctacca 3168
Query: 841 cagagtcatcttgttggtctt 861
|||||||||||||||||||||
Sbjct: 3167 cagagtcatcttgttggtctt 3147
>3x_Contig720
Length = 2178
Score = 147 bits (74), Expect = 2e-35
Identities = 75/76 (98%)
Strand = Plus / Minus
Query: 382 aaagccctgtggggggctcgaacccccaaccttgtgattaagagtcacacgcgcyaccga 441
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1450 aaagccctgtggggggctcgaacccccaaccttgtgattaagagtcacacgcgctaccga 1391
Query: 442 ttgcgccaacaaggca 457
||||||||||||||||
Sbjct: 1390 ttgcgccaacaaggca 1375
>3x_Contig587
Length = 1528
Score = 147 bits (74), Expect = 2e-35
Identities = 79/82 (96%)
Strand = Plus / Plus
Query: 375 aaaamataaagccctgtggggggctcgaacccccaaccttgtgattaagagtcacacgcg 434
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 aaaaaagaaagccctgtggggggctcgaacccccaaccttgtgattaagagtcacacgcg 234
Query: 435 cyaccgattgcgccaacaaggc 456
| ||||||||||||||||||||
Sbjct: 235 ctaccgattgcgccaacaaggc 256
>3x_Contig1798
Length = 38968
Score = 145 bits (73), Expect = 1e-34
Identities = 74/75 (98%)
Strand = Plus / Plus
Query: 382 aaagccctgtggggggctcgaacccccaaccttgtgattaagagtcacacgcgcyaccga 441
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 31958 aaagccctgtggggggctcgaacccccaaccttgtgattaagagtcacacgcgctaccga 32017
Query: 442 ttgcgccaacaaggc 456
|||||||||||||||
Sbjct: 32018 ttgcgccaacaaggc 32032
>3x_Contig848
Length = 3091
Score = 138 bits (69), Expect = 2e-32
Identities = 80/85 (94%)
Strand = Plus / Plus
Query: 372 gggaaaamataaagccctgtggggggctcgaacccccaaccttgtgattaagagtcacac 431
||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 gggaaaaaagaaagccctgcggggggctcgaacccccaaccttgtgattaagagtcacac 1057
Query: 432 gcgcyaccgattgcgccaacaaggc 456
|||| ||||||||||||| ||||||
Sbjct: 1058 gcgctaccgattgcgccagcaaggc 1082
>3x_Contig1
Length = 735
Score = 132 bits (66), Expect = 2e-30
Identities = 77/82 (93%)
Strand = Plus / Minus
Query: 375 aaaamataaagccctgtggggggctcgaacccccaaccttgtgattaagagtcacacgcg 434
|||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 aaaaaacaaagccctgcggggggctcgaacccccaaccttgtgattaagagtcacacgcg 220
Query: 435 cyaccgattgcgccaacaaggc 456
| ||||||||||||| ||||||
Sbjct: 219 ctaccgattgcgccagcaaggc 198
>3x_Contig1347
Length = 6130
Score = 130 bits (65), Expect = 6e-30
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 382 aaagccctgtggggggctcgaacccccaaccttgtgattaagagtcacacgcgcyaccga 441
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4655 aaagccctgcggggggctcgaacccccaaccttgtgattaagagtcacacgcgctaccga 4714
Query: 442 ttgcgccaacaaggc 456
|||||||| ||||||
Sbjct: 4715 ttgcgccagcaaggc 4729
>3x_Contig1020
Length = 4879
Score = 130 bits (65), Expect = 6e-30
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 382 aaagccctgtggggggctcgaacccccaaccttgtgattaagagtcacacgcgcyaccga 441
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 3547 aaagccctgcggggggctcgaacccccaaccttgtgattaagagtcacacgcgctaccga 3606
Query: 442 ttgcgccaacaaggc 456
|||||||| ||||||
Sbjct: 3607 ttgcgccagcaaggc 3621
>3x_Contig537
Length = 3151
Score = 106 bits (53), Expect = 1e-22
Identities = 64/67 (95%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 383 aagccctgtggggggctcgaacccccaaccttgtgattaagagtcacacgcgcyaccgat 442
|||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 3019 aagccctgcggggggctcgaacccc-aaccttgtgattaagagtcacacgcgctaccgat 3077
Query: 443 tgcgcca 449
|||||||
Sbjct: 3078 tgcgcca 3084
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5390
Number of Sequences: 1807
Number of extensions: 5390
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 9
length of query: 861
length of database: 10,358,551
effective HSP length: 16
effective length of query: 845
effective length of database: 10,329,639
effective search space: 8728544955
effective search space used: 8728544955
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)